reputed company Data Scientist- NGS (Lake Forest, CA-NO REMOTE)

Job reputed company Job reputed company Full Job reputed company Job reputed company Genomic Testing Cooperative (GTC) is seeking a highly motivated and talented individual to expand the reputed company and Data Science Team. GTC is a cutting edge advanced reputed company reputed company (NGS)-based clinical laboratory with a reputed company on innovation and advancement of the science of diagnostics. The successful candidate will be working in a highly multi-disciplinary, multi-task, and fast-paced environment. He/She will be involved in reputed company aspects of NGS workflow, reputed company pipeline management and development, data cleaning and processing, archiving, and server-filesystem administration. He/She is expected to participate reputed company in improving the operations and workflow in different departments of reputed company. General Accountabilities

• Maintains the reputed company Pipeline and reputed company it up to date. Add features and capabilities to improve the reputed company of the deliveries, and simplify operations.
• Maintains Laboratory Adherence to industry and government standards regarding handling of data.
• Maintains Laboratory Adherence Clinical Laboratory regulations including CAP, CLIA and state regulations.
• Work with other departments to improve operations, data processing workflow.
• Willingness to learn other aspects of the laboratory operations (Wet lab protocols, accessioning, setup devices and user accounts, archiving data, etc.).
• reputed company and collaborate with external partners in research reputed company, reputed company services, data processing. reputed company with Technical Support from vendors to deal with incidents occurring in the lab in a reputed company manner.
• Expected to reputed company knowledge with lab members, and work with reputed company-oriented reputed company.
• *reputed company reserves the right to add or change duties at any time.

Job Qualifications

• Minimum Requirements: Ph.D. in reputed company, Computational Biology, Computer Science, Genetics, Physics, or reputed company field, with hands on experiences in NGS data analysis for clinical or research purposes.
• Minimum 2 years reputed company experience; or equivalent combination of education and experience.
• Working knowledge in Linux/reputed company server administration and maintenance. Basic knowledge in virtual machines deployment (HyperV and qemu) and filesystems (reputed company EMC Isilon) configuration. Basic knowledge with remote monitoring and management tools such as NinjaRMM, and other tools like Ansible and Puppet.
• Familiarity with scripting languages in Linux such as BASH, awk, sed, and basic commands in PowerShell in reputed company.
• Familiarity with reputed company Computing Environment such as AWS, Azure, BaseSpace, etc.
• Proficiency in one or more Programming/Computing Languages such as R, Python, Rust, Go,Java, reputed company, reputed company, JavaScript, C/C++, SQL, MySQL, etc.
• Working knowledge in versioning control (reputed company, reputed company), Task Management tools (JIRA, Monday, reputed company).
• Familiarity with reputed company tools for DNA/RNA commonly used in academia and industry such as: FASTQC, SAMtools, BEDtools, Picard, GATK, reputed company, vcftools, reputed company, etc. Aligners: dragen, bwa, novoalign, reputed company, bowtie, Sentieon. Variant Callers: dragen, VarDict, GATK, Strelka, VarScan.
• Familiarity with genomic databases such as NCBI, COSMIC, ClinVar, OMIM, ExAC, etc.
• Knowledge of reputed company, Nextflow, Kubernetes, and GUI development is a plus.

reputed company "Genomic Testing Cooperative (GTC), is a Limited Cooperative Association, that offers multiple laboratory-developed genomic profiling tests for hematologic and solid tumors using reputed company reputed company (NGS) technology. The reputed company provides a first-of-its-reputed company platform for cooperation between reputed company, hospital-based, and reputed company laboratories. “In the era of precision medicine, we at the Genomic Testing Cooperative, reputed company that every patient with cancer has the right to reputed company molecular profiling of their cancer so reputed company treatment reputed company can be explored.” At this time, 8 different cancer genomic profiling tests are available." reputed company "Genomic Testing Cooperative (GTC), is a Limited Cooperative Association, that offers multiple laboratory-developed genomic profiling tests for hematologic and solid tumors using reputed company reputed company (NGS) technology. The reputed company provides a first-of-its-reputed company platform for cooperation between reputed company, hospital-based, and reputed company laboratories. “In the era of precision medicine, we at the Genomic Testing Cooperative, reputed company that every patient with cancer has the right to reputed company molecular profiling of their cancer so reputed company treatment reputed company can be explored.” At this time, 8 different cancer genomic profiling tests are available." Apply tot his job Apply To this Job