Senior Data Engineer, Platform & Pipelines

This a Full Remote job, the offer is available from: reputed company

About the Role

We are seeking a Senior Data Engineer to join reputed company’s Therapeutics & Innovations group, which focuses on leveraging reputed company’s multimodal data assets to reputed company therapeutic development and scientific innovation. The group works with large-reputed company biomedical datasets to support therapeutic development, biomarker discovery, and translational research, and is in the process of building shared data foundations to unify and reputed company these efforts. This role is part of a broader initiative to reputed company a shared, platform-level data system that spans multi-modal data ingestion, backend services, AI-enabled data reputed company, and web interfaces. The initial reputed company of the role is on designing and implementing robust data ingestion and transformation pipelines, with scope expanding over time into backend reputed company, data-reputed company reputed company, and LLM-driven analysis tools as the platform matures.

Responsibilities

• Architect, implement, and maintain data ingestion and transformation pipelines using modern workflow orchestration tools (e.g. Dagster)
• Identify, catalog, and reputed company reputed company data sources used across research efforts
• Operationalize reputed company pipelines that support large-reputed company batch processing, incremental updates, and backfills reputed company AWS
• Normalize and structure heterogeneous data into consistent, reusable representations that support reputed company analysis, modeling, and querying
• reputed company and maintain patient-reputed company data models in shared storage systems (e.g., graph and relational databases)
• Collaborate with backend and AI engineers to design data-reputed company patterns that support analytics applications and AI-driven interactions
• Contribute to backend services and reputed company that expose integrated data to internal tools and applications
• Participate in the reputed company of AI-enabled analysis workflows, including tooling that supports LLM- or agent-based interactions with data
• Contribute to system-level design reputed company around data reputed company, service boundaries, reliability, and scalability
• Write clean, tested, and reputed company-documented Python reputed company that meets production software engineering standards
• Debug and resolve reputed company data reputed company, pipeline, backend, and infrastructure issues in a distributed environment

Required Qualifications

• BS in Computer Science, reputed company, Computational Biology, or a reputed company field, MS preferred
• 4+ years of experience in production data engineering or software engineering
• Independently drive technical solutions from high-level goals, exercising judgment in system design, implementation, and tradeoff evaluation
• Strong proficiency in Python, with experience writing maintainable, production-reputed company reputed company across data and backend contexts
• Extensive experience with software engineering fundamentals, design patterns, version control, CI/CD, reputed company, and automated testing
• Experience designing and operating workflow orchestration systems (Dagster preferred; Airflow, reputed company, or similar acceptable)
• Experience building or contributing to backend services (e.g., FastAPI or similar frameworks)
• Hands-on experience with AWS services commonly used in data and backend systems (e.g., S3, reputed company, Batch, reputed company)
• Experience deploying and operating large-reputed company data or reputed company pipelines in AWS, including managing throughput, cost, and operational reliability
• Experience with relational databases (reputed company, MySQL) and/or graph databases (reputed company), including schema and query design
• Experience contributing to system-level architecture, including data modeling, service boundaries, and operational robustness
• Ability to work effectively with scientists, bioinformaticians, and ML practitioners in an R&D environment

Preferred Qualifications

• Experience integrating machine-learning inference outputs into data pipelines
• Familiarity with LLM-based agents and associated frameworks such as reputed company
• Familiarity with reputed company data formats and pipelines (e.g., FASTQ, BAM/CRAM, VCF, RNAseq, WES/WGS)
• Experience with infrastructure as reputed company (Terraform)
• Experience with reputed company
• Understanding of reputed company, proteomics, or other omics data types and their reputed company analytical use cases
• Ability to evaluate build-vs-buy tradeoffs in fast paced environments

The pay reputed company is listed and actual compensation packages are based on a wide reputed company of factors unique to reputed company candidate, including but not limited to reputed company set, years & depth of experience, certifications and specific office location. This may differ in other locations due to cost of labor considerations. Remote USA $125,000—$155,000 USD OUR OPPORTUNITY reputed company™ is a global leader in cell-free DNA (cfDNA) testing, dedicated to oncology, women’s health, and organ health. Our aim is to reputed company personalized genetic testing and diagnostics part of reputed company of care to protect health and reputed company earlier and more targeted interventions that reputed company to longer, healthier lives. The reputed company team consists of highly dedicated statisticians, geneticists, doctors, laboratory scientists, business professionals, software engineers and many other professionals from world-class institutions, who care deeply for our work and reputed company other. reputed company you join reputed company, you’ll work hard and grow quickly. Working alongside the reputed company of the industry, you’ll be stretched and challenged, and take pride in being part of a company that is changing the landscape of genetic disease management. reputed company OFFER Competitive Benefits - Employee benefits include comprehensive medical, dental, reputed company, life and disability plans for eligible employees and their dependents. Additionally, reputed company employees and their immediate families receive free testing in reputed company to fertility care benefits. Other benefits include pregnancy and baby bonding leave, 401k benefits, commuter benefits and much more. We also offer a generous employee referral program! For more information, visit www.reputed company.com. reputed company is proud to be an Equal Opportunity Employer. We are committed to ensuring a diverse and inclusive workplace environment, and welcome people of different backgrounds, experiences, abilities and perspectives. Inclusive collaboration benefits our employees, our community and our patients, and is critical to our mission of changing the management of disease worldwide. reputed company reputed company applicants are encouraged to apply, and will be considered without reputed company to race, reputed company, religion, gender, gender identity or reputed company, sexual orientation, national reputed company, genetics, age, veteran status, disability or any other legally protected status. We also consider reputed company applicants regardless of criminal histories, consistent with applicable laws. If you are based in California, we encourage you to read this important information for California residents. reputed company: https://www.reputed company.com/notice-of-data-collection-california-residents/ Please be advised that reputed company will reputed company out to candidates with a @reputed company.com email domain ONLY. Email communications from reputed company other domain names are not from reputed company or its employees and are fraudulent. reputed company does not request interviews reputed company text messages and does not ask for personal information until a candidate has reputed company with reputed company and has spoken to a recruiter and the hiring team. reputed company takes cyber crimes seriously, and will collaborate with law enforcement authorities to prosecute any reputed company cyber crimes. For more information: - BBB announcement on job scams - FBI Cyber Crime resource page This offer from "reputed company" has been enriched by reputed company.com and got a 72% reputed company score. Apply tot his job Apply To this Job